************************************************
* START TREE SEARCH USING MPI WITH 1 PROCESSES *
************************************************
Random seed of master = 710344
IQ-TREE MPI multicore version 1.5.5 for Linux 64-bit built May 30 2018
Copyright (c) 2011-2017 by Bui Quang Minh, Nguyen Lam Tung,
Olga Chernomor, Heiko Schmidt, and Arndt von Haeseler.

Host:    holy7c04507.rc.fas.harvard.edu (AVX512, FMA3, 188 GB RAM)
Command: /n/helmod/apps/centos7/MPI/gcc/7.1.0-fasrc01/openmpi/2.1.0-fasrc02/iqtree/1.5.5-fasrc02/bin/iqtree-omp-mpi -nt 48 -st AA -ninit 10 -bb 1500 -msub nuclear -s 15cephala_compofail.phy -m MFP+MERGE -rcluster 10 -madd LG4M,LG4X,LG+C10,LG+C20,LG+C30,LG+C40,LG+C50,LG+C60 -mrate G,R,E
Seed:    710344 (Using SPRNG - Scalable Parallel Random Number Generator)
Time:    Tue Apr  7 16:35:46 2020
Kernel:  AVX+FMA - 48 threads (48 CPU cores detected)

Reading alignment file 15cephala_compofail.phy ... Phylip format detected
Alignment most likely contains protein sequences
Alignment has 27 sequences with 314338 columns and 177712 patterns (91553 informative sites, 164549 constant sites)
                                         Gap/Ambiguity  Composition  p-value
   1  Cylichnatys_sp.?_MCZ_Mala_387550                       21.69%    failed      0.00%
   2  Acteocina_sp._MCZ_Mala_386342._MCZ_Mala_387541                   23.03%    failed      0.37%
   3  Bulla_gouldiana_MCZ_Mala_388933                            36.10%    failed      0.00%
   4  Newnesia_antarctica_SIO-BIC_M16270                               21.11%    failed      0.00%
   5  Abavopsis_latosoleata_ZSM_Mol_20142034        22.15%    failed      0.11%
   6  Siphopteron_nigromarginatum_MCZ_3875353   22.03%    failed      0.00%
   7  Gastropteron_rubrum_ZSM_20142005          29.33%    failed      0.00%
   8  Philinoglossa_praelongata_ZSM_20142032    20.51%    failed      0.00%
   9  Dolabrifera_dolabrifera_MCZ_Mala_384336_MCZ_Mala_384336                   69.38%    failed      0.00%
  10  Colpodaspis_thompsoni_MCZ_Mala_387534           32.67%    failed      0.07%
  11  Clione_limacina_antarctica_SRR1505107                         36.96%    failed      0.00%
  12  Acteocina_sp._MCZ_Mala_386342._MCZ_Mala_386342                              60.55%    failed      0.00%
  13  Spinophallus_falciphallus_MCZ_Mala_385531                 77.00%    failed      0.00%
  14  Camachoaglaja_cf._berolina_MCZ_Mala_384347                                 44.67%    failed      0.00%
  15  Haminoea_antillarum_SRR1505111_SRR1505111                       35.26%    failed      0.00%
  16  Dolabella_auricularia_MCZ_386346          34.00%    failed      0.00%
  17  Philine_quadripartita_ZSM_Mol_20170311          28.92%    failed      0.00%
  18  Navanax_inermis_MCZ_388934                21.36%    failed      0.00%
  19  Phanerophthalmus_luteus_MCZ_Mala_386354                24.94%    failed      0.01%
  20  Limacina_helicina_MCZ_Mala_393334_MCZ_Mala_393334                         72.87%    failed      0.00%
  21  Odontoglaja_guamensis_MCZ_Mala_386324_MCZ_Mala_386324                     85.44%    failed      0.00%
  22  Mnestia_sp._MCZ_Mala_387530                47.35%    failed      0.00%
  23  Diniatys_dentifer_MCZ_Mala_387511               53.31%    failed      0.00%
  24  Acteocina_inculta_MCZ_388932              78.83%    failed      0.00%
  25  Mariaglaja_inornata_MCZ_Mala_385532                      90.05%    failed      0.00%
  26  Sagaminopteron_ornatum_MCZ_Mala_385476_MCZ_Mala_385476                    59.53%    failed      0.00%
  27  Haloa_sp._MCZ_Mala_385550                               97.71%    failed      0.00%
WARNING: 10 sequences contain more than 50% gaps/ambiguity
****  TOTAL                                     46.18%  27 sequences failed composition chi2 test (p-value<5%; df=19)
NOTE: minimal branch length is reduced to 0.000000318129 for long alignment

Create initial parsimony tree by phylogenetic likelihood library (PLL)... 0.813 seconds

NOTE: ModelFinder requires 8430 MB RAM!
ModelFinder will test 206 protein models (sample size: 314338) ...
 No. Model         -LnL         df  AIC          AICc         BIC
  1  Dayhoff+G4    3648051.310  52  7296206.620  7296206.637  7296760.848
  2  Dayhoff+R2    3670020.913  53  7340147.826  7340147.845  7340712.712
  3  Dayhoff+R3    3642785.237  55  7285680.475  7285680.494  7286266.677
  4  Dayhoff+R4    3639695.598  57  7279505.196  7279505.217  7280112.714
  5  Dayhoff+R5    3639351.309  59  7278820.618  7278820.641  7279449.454
  6  Dayhoff+R6    3639330.562  61  7278783.124  7278783.148  7279433.275
  7  Dayhoff+R7    3639321.341  63  7278768.682  7278768.708  7279440.150
  8  Dayhoff+R8    Skipped 
  9  Dayhoff+R9    Skipped 
 10  Dayhoff+R10   Skipped 
 11  Dayhoff       3936098.229  51  7872298.458  7872298.475  7872842.028
 12  Dayhoff+F+G4  3636975.381  71  7274092.762  7274092.795  7274849.496
 13  Dayhoff+F+R2  3660418.276  72  7320980.552  7320980.585  7321747.944
 14  Dayhoff+F+R3  3631795.090  74  7263738.179  7263738.215  7264526.888
 15  Dayhoff+F+R4  3628349.561  76  7256851.123  7256851.160  7257661.148
 16  Dayhoff+F+R5  3627924.619  78  7256005.238  7256005.277  7256836.579
 17  Dayhoff+F+R6  3627875.767  80  7255911.534  7255911.575  7256764.192
 18  Dayhoff+F+R7  3627844.268  82  7255852.536  7255852.579  7256726.510
 19  Dayhoff+F+R8  3627823.786  84  7255815.571  7255815.617  7256710.862
 20  Dayhoff+F+R9  3627819.282  86  7255810.564  7255810.612  7256727.172
 21  Dayhoff+F+R10 Skipped 
 22  Dayhoff+F     3933659.034  70  7867458.068  7867458.099  7868204.143
 23  JTT+G4        3625533.968  52  7251171.935  7251171.953  7251726.163
 24  JTT+R2        3644919.592  53  7289945.183  7289945.202  7290510.069
 25  JTT+R3        3619856.316  55  7239822.632  7239822.652  7240408.834
 26  JTT+R4        3617317.140  57  7234748.281  7234748.302  7235355.799
 27  JTT+R5        3617096.261  59  7234310.522  7234310.544  7234939.357
 28  JTT+R6        3617080.433  61  7234282.866  7234282.890  7234933.017
 29  JTT+R7        3617075.043  63  7234276.085  7234276.111  7234947.553
 30  JTT+R8        Skipped 
 31  JTT+R9        Skipped 
 32  JTT+R10       Skipped 
 33  JTT           3910845.141  51  7821792.282  7821792.299  7822335.852
 34  JTT+F+G4      3620627.325  71  7241396.649  7241396.682  7242153.383
 35  JTT+F+R2      3640211.869  72  7280567.737  7280567.771  7281335.129
 36  JTT+F+R3      3614869.875  74  7229887.751  7229887.786  7230676.460
 37  JTT+F+R4      3612281.374  76  7224714.748  7224714.786  7225524.773
 38  JTT+F+R5      3612007.829  78  7224171.659  7224171.698  7225003.000
 39  JTT+F+R6      3611993.364  80  7224146.728  7224146.769  7224999.386
 40  JTT+F+R7      3611986.798  82  7224137.596  7224137.639  7225011.570
 41  JTT+F+R8      Skipped 
 42  JTT+F+R9      Skipped 
 43  JTT+F+R10     Skipped 
 44  JTT+F         3907680.783  70  7815501.567  7815501.598  7816247.642
 45  WAG+G4        3636208.731  52  7272521.462  7272521.479  7273075.689
 46  WAG+R2        3653935.262  53  7307976.524  7307976.542  7308541.409
 47  WAG+R3        3631239.499  55  7262588.998  7262589.018  7263175.201
 48  WAG+R4        3629062.659  57  7258239.319  7258239.340  7258846.838
 49  WAG+R5        3628878.517  59  7257875.034  7257875.057  7258503.869
 50  WAG+R6        3628872.102  61  7257866.205  7257866.229  7258516.357
 51  WAG+R7        Skipped 
 52  WAG+R8        Skipped 
 53  WAG+R9        Skipped 
 54  WAG+R10       Skipped 
 55  WAG           3913237.588  51  7826577.176  7826577.192  7827120.745
 56  WAG+F+G4      3635721.472  71  7271584.943  7271584.976  7272341.677
 57  WAG+F+R2      3654276.681  72  7308697.362  7308697.395  7309464.754
 58  WAG+F+R3      3630740.530  74  7261629.059  7261629.095  7262417.768
 59  WAG+F+R4      3628334.685  76  7256821.370  7256821.408  7257631.395
 60  WAG+F+R5      3628087.804  78  7256331.608  7256331.647  7257162.950
 61  WAG+F+R6      3628078.016  80  7256316.033  7256316.074  7257168.690
 62  WAG+F+R7      Skipped 
 63  WAG+F+R8      Skipped 
 64  WAG+F+R9      Skipped 
 65  WAG+F+R10     Skipped 
 66  WAG+F         3916870.043  70  7833880.086  7833880.118  7834626.162
 67  VT+G4         3642818.039  52  7285740.077  7285740.095  7286294.305
 68  VT+R2         3658316.920  53  7316739.840  7316739.858  7317304.726
 69  VT+R3         3638297.446  55  7276704.892  7276704.912  7277291.094
 70  VT+R4         3636620.531  57  7273355.062  7273355.083  7273962.580
 71  VT+R5         3636534.090  59  7273186.179  7273186.202  7273815.014
 72  VT+R6         3636529.328  61  7273180.655  7273180.679  7273830.807
 73  VT+R7         Skipped 
 74  VT+R8         Skipped 
 75  VT+R9         Skipped 
 76  VT+R10        Skipped 
 77  VT            3911827.727  51  7823757.454  7823757.471  7824301.023
 78  VT+F+G4       3639110.332  71  7278362.664  7278362.696  7279119.398
 79  VT+F+R2       3654687.937  72  7309519.874  7309519.908  7310287.266
 80  VT+F+R3       3634590.364  74  7269328.728  7269328.763  7270117.436
 81  VT+F+R4       3632852.705  76  7265857.410  7265857.447  7266667.435
 82  VT+F+R5       3632734.374  78  7265624.747  7265624.786  7266456.089
 83  VT+F+R6       3632729.042  80  7265618.085  7265618.126  7266470.743
 84  VT+F+R7       Skipped 
 85  VT+F+R8       Skipped 
 86  VT+F+R9       Skipped 
 87  VT+F+R10      Skipped 
 88  VT+F          3907857.648  70  7815855.297  7815855.328  7816601.372
 89  LG+G4         3634663.508  52  7269431.015  7269431.033  7269985.243
 90  LG+R2         3656061.141  53  7312228.282  7312228.300  7312793.168
 91  LG+R3         3629020.939  55  7258151.879  7258151.899  7258738.081
 92  LG+R4         3625885.800  57  7251885.599  7251885.620  7252493.118
 93  LG+R5         3625572.947  59  7251263.894  7251263.916  7251892.729
 94  LG+R6         3625541.997  61  7251205.994  7251206.018  7251856.145
 95  LG+R7         3625535.864  63  7251197.729  7251197.754  7251869.197
 96  LG+R8         Skipped 
 97  LG+R9         Skipped 
 98  LG+R10        Skipped 
 99  LG            3932833.653  51  7865769.306  7865769.323  7866312.875
100  LG+F+G4       3625144.695  71  7250431.389  7250431.422  7251188.123
101  LG+F+R2       3645988.196  72  7292120.391  7292120.425  7292887.783
102  LG+F+R3       3619362.591  74  7238873.181  7238873.216  7239661.890
103  LG+F+R4       3616237.441  76  7232626.882  7232626.919  7233436.907
104  LG+F+R5       3615872.652  78  7231901.303  7231901.343  7232732.645
105  LG+F+R6       3615840.978  80  7231841.957  7231841.998  7232694.615
106  LG+F+R7       3615834.819  82  7231833.638  7231833.682  7232707.613
107  LG+F+R8       Skipped 
108  LG+F+R9       Skipped 
109  LG+F+R10      Skipped 
110  LG+F          3918702.800  70  7837545.599  7837545.631  7838291.675
111  DCMut+G4      3648285.857  52  7296675.715  7296675.732  7297229.942
112  DCMut+R2      3670173.034  53  7340452.068  7340452.087  7341016.954
113  DCMut+R3      3643033.886  55  7286177.771  7286177.791  7286763.974
114  DCMut+R4      3639955.942  57  7280025.883  7280025.904  7280633.402
115  DCMut+R5      3639601.478  59  7279320.956  7279320.978  7279949.791
116  DCMut+R6      3639539.647  61  7279201.294  7279201.318  7279851.446
117  DCMut+R7      3639533.571  63  7279193.142  7279193.167  7279864.610
118  DCMut+R8      Skipped 
119  DCMut+R9      Skipped 
120  DCMut+R10     Skipped 
121  DCMut         3935970.106  51  7872042.212  7872042.229  7872585.782
122  DCMut+F+G4    3637133.400  71  7274408.800  7274408.832  7275165.534
123  DCMut+F+R2    3660482.624  72  7321109.248  7321109.282  7321876.640
124  DCMut+F+R3    3631964.485  74  7264076.969  7264077.004  7264865.678
125  DCMut+F+R4    3628532.732  76  7257217.463  7257217.501  7258027.488
126  DCMut+F+R5    3628104.933  78  7256365.867  7256365.906  7257197.208
127  DCMut+F+R6    3628010.422  80  7256180.845  7256180.886  7257033.503
128  DCMut+F+R7    3628006.052  82  7256176.103  7256176.147  7257050.078
129  DCMut+F+R8    Skipped 
130  DCMut+F+R9    Skipped 
131  DCMut+F+R10   Skipped 
132  DCMut+F       3933361.335  70  7866862.670  7866862.701  7867608.745
133  PMB+G4        3684271.671  52  7368647.342  7368647.359  7369201.570
134  PMB+R2        3699655.267  53  7399416.534  7399416.552  7399981.420
135  PMB+R3        3680039.766  55  7360189.531  7360189.551  7360775.734
136  PMB+R4        3678492.535  57  7357099.070  7357099.091  7357706.588
137  PMB+R5        3678441.318  59  7357000.636  7357000.658  7357629.471
138  PMB+R6        3678436.106  61  7356994.213  7356994.237  7357644.365
139  PMB+R7        Skipped 
140  PMB+R8        Skipped 
141  PMB+R9        Skipped 
142  PMB+R10       Skipped 
143  PMB           3955725.234  51  7911552.468  7911552.485  7912096.038
144  PMB+F+G4      3669758.728  71  7339659.456  7339659.488  7340416.190
145  PMB+F+R2      3685365.125  72  7370874.250  7370874.283  7371641.642
146  PMB+F+R3      3665281.842  74  7330711.685  7330711.720  7331500.394
147  PMB+F+R4      3663561.295  76  7327274.590  7327274.628  7328084.616
148  PMB+F+R5      3663457.407  78  7327070.815  7327070.854  7327902.156
149  PMB+F+R6      3663453.704  80  7327067.409  7327067.450  7327920.067
150  PMB+F+R7      Skipped 
151  PMB+F+R8      Skipped 
152  PMB+F+R9      Skipped 
153  PMB+F+R10     Skipped 
154  PMB+F         3940481.840  70  7881103.680  7881103.711  7881849.755
155  JTTDCMut+G4   3625565.865  52  7251235.730  7251235.747  7251789.957
156  JTTDCMut+R2   3645021.793  53  7290149.587  7290149.605  7290714.472
157  JTTDCMut+R3   3619884.286  55  7239878.572  7239878.592  7240464.775
158  JTTDCMut+R4   3617342.560  57  7234799.121  7234799.142  7235406.640
159  JTTDCMut+R5   3617117.605  59  7234353.209  7234353.232  7234982.044
160  JTTDCMut+R6   3617098.770  61  7234319.541  7234319.565  7234969.693
161  JTTDCMut+R7   3617098.578  63  7234323.156  7234323.182  7234994.624
162  JTTDCMut+R8   Skipped 
163  JTTDCMut+R9   Skipped 
164  JTTDCMut+R10  Skipped 
165  JTTDCMut      3910584.439  51  7821270.879  7821270.895  7821814.448
166  JTTDCMut+F+G4 3620869.258  71  7241880.516  7241880.549  7242637.250
167  JTTDCMut+F+R2 3640567.321  72  7281278.642  7281278.676  7282046.034
168  JTTDCMut+F+R3 3615117.258  74  7230382.515  7230382.550  7231171.224
169  JTTDCMut+F+R4 3612518.616  76  7225189.232  7225189.269  7225999.257
170  JTTDCMut+F+R5 3612242.573  78  7224641.146  7224641.185  7225472.488
171  JTTDCMut+F+R6 3612221.823  80  7224603.647  7224603.688  7225456.305
172  JTTDCMut+F+R7 3612219.352  82  7224602.704  7224602.747  7225476.678
173  JTTDCMut+F+R8 Skipped 
174  JTTDCMut+F+R9 Skipped 
175  JTTDCMut+F+R10 Skipped 
176  JTTDCMut+F    3908002.923  70  7816145.847  7816145.879  7816891.923
177  Blosum62+G4   3687930.161  52  7375964.322  7375964.339  7376518.549
178  Blosum62+R2   3703775.977  53  7407657.954  7407657.972  7408222.839
179  Blosum62+R3   3683704.695  55  7367519.389  7367519.409  7368105.592
180  Blosum62+R4   3682011.823  57  7364137.647  7364137.668  7364745.166
181  Blosum62+R5   3681926.845  59  7363971.690  7363971.712  7364600.525
182  Blosum62+R6   3681922.150  61  7363966.300  7363966.324  7364616.451
183  Blosum62+R7   Skipped 
184  Blosum62+R8   Skipped 
185  Blosum62+R9   Skipped 
186  Blosum62+R10  Skipped 
187  Blosum62      3960156.972  51  7920415.944  7920415.961  7920959.513
188  Blosum62+F+G4 3673122.074  71  7346386.148  7346386.180  7347142.882
189  Blosum62+F+R2 3689222.297  72  7378588.594  7378588.628  7379355.986
190  Blosum62+F+R3 3668670.189  74  7337488.377  7337488.413  7338277.086
191  Blosum62+F+R4 3666757.587  76  7333667.173  7333667.211  7334477.198
192  Blosum62+F+R5 3666629.183  78  7333414.367  7333414.406  7334245.708
193  Blosum62+F+R6 3666619.734  80  7333399.469  7333399.510  7334252.127
194  Blosum62+F+R7 Skipped 
195  Blosum62+F+R8 Skipped 
196  Blosum62+F+R9 Skipped 
197  Blosum62+F+R10 Skipped 
198  Blosum62+F    3944762.756  70  7889665.512  7889665.544  7890411.588
Model LG4M is alias for MIX{LG4M1,LG4M2,LG4M3,LG4M4}*G4
199  LG4M          3649329.462  52  7298762.925  7298762.942  7299317.152
Model LG4X is alias for MIX{LG4X1,LG4X2,LG4X3,LG4X4}*R4
200  LG4X          3641716.584  57  7283547.168  7283547.189  7284154.687
Model LG+C10 is alias for LG+POISSON+G+FMIX{C10pi1:1:0.1191344178,C10pi2:1:0.0874372456,C10pi3:1:0.1037105070,C10pi4:1:0.0922584809,C10pi5:1:0.1070492801,C10pi6:1:0.1329945166,C10pi7:1:0.0538028458,C10pi8:1:0.0691986212,C10pi9:1:0.1319937434,C10pi10:1:0.1024203429}
201  LG+C10        3649205.483  52  7298514.966  7298514.983  7299069.194
Model LG+C20 is alias for LG+POISSON+G+FMIX{C20pi1:1:0.0559910600,C20pi2:1:0.0514824870,C20pi3:1:0.0812922124,C20pi4:1:0.0721976867,C20pi5:1:0.0556718858,C20pi6:1:0.0331003080,C20pi7:1:0.0589501763,C20pi8:1:0.0263756889,C20pi9:1:0.0307584220,C20pi10:1:0.0376701125,C20pi11:1:0.0303058290,C20pi12:1:0.0808775576,C20pi13:1:0.0263349134,C20pi14:1:0.0579101455,C20pi15:1:0.0371248064,C20pi16:1:0.0586867766,C20pi17:1:0.0561479138,C20pi18:1:0.0349810886,C20pi19:1:0.0544937394,C20pi20:1:0.0596471901}
202  LG+C20        3625263.442  52  7250630.885  7250630.903  7251185.113
Model LG+C30 is alias for LG+POISSON+G+FMIX{C30pi1:1:0.0095783264,C30pi2:1:0.0248476365,C30pi3:1:0.0636309366,C30pi4:1:0.0537939225,C30pi5:1:0.0295885587,C30pi6:1:0.0117587936,C30pi7:1:0.0132013428,C30pi8:1:0.0236868805,C30pi9:1:0.0261687659,C30pi10:1:0.0239821974,C30pi11:1:0.0257100906,C30pi12:1:0.0465072425,C30pi13:1:0.0546794546,C30pi14:1:0.0536085131,C30pi15:1:0.0270622670,C30pi16:1:0.0403913593,C30pi17:1:0.0474212700,C30pi18:1:0.0458816478,C30pi19:1:0.0214036510,C30pi20:1:0.0290385981,C30pi21:1:0.0123391793,C30pi22:1:0.0569350229,C30pi23:1:0.0419687568,C30pi24:1:0.0339027062,C30pi25:1:0.0388777376,C30pi26:1:0.0196343766,C30pi27:1:0.0233086174,C30pi28:1:0.0622722654,C30pi29:1:0.0184803385,C30pi30:1:0.0203395454}
203  LG+C30        3623105.549  52  7246315.097  7246315.115  7246869.325
Model LG+C40 is alias for LG+POISSON+G+FMIX{C40pi1:1:0.0223853788,C40pi2:1:0.0338891820,C40pi3:1:0.0577169375,C40pi4:1:0.0252416233,C40pi5:1:0.0108607921,C40pi6:1:0.0462373793,C40pi7:1:0.0102293175,C40pi8:1:0.0147523625,C40pi9:1:0.0143161352,C40pi10:1:0.0182302541,C40pi11:1:0.0204025079,C40pi12:1:0.0425505156,C40pi13:1:0.0248627269,C40pi14:1:0.0105892988,C40pi15:1:0.0188238725,C40pi16:1:0.0086663445,C40pi17:1:0.0148496147,C40pi18:1:0.0343037402,C40pi19:1:0.0225335203,C40pi20:1:0.0174068578,C40pi21:1:0.0112207827,C40pi22:1:0.0443532245,C40pi23:1:0.0392573370,C40pi24:1:0.0196756555,C40pi25:1:0.0287690328,C40pi26:1:0.0114441177,C40pi27:1:0.0112338740,C40pi28:1:0.0582694099,C40pi29:1:0.0444272279,C40pi30:1:0.0112010942,C40pi31:1:0.0145176111,C40pi32:1:0.0114629026,C40pi33:1:0.0239628061,C40pi34:1:0.0266266492,C40pi35:1:0.0481201159,C40pi36:1:0.0371147423,C40pi37:1:0.0160476688,C40pi38:1:0.0237249267,C40pi39:1:0.0235226203,C40pi40:1:0.0261998398}
204  LG+C40        3621607.006  52  7243318.013  7243318.030  7243872.240
Model LG+C50 is alias for LG+POISSON+G+FMIX{C50pi1:1:0.0164297003,C50pi2:1:0.0273175755,C50pi3:1:0.0460247610,C50pi4:1:0.0084864734,C50pi5:1:0.0125389252,C50pi6:1:0.0343549036,C50pi7:1:0.0130241102,C50pi8:1:0.0094755681,C50pi9:1:0.0190040551,C50pi10:1:0.0151902354,C50pi11:1:0.0320534760,C50pi12:1:0.0210059850,C50pi13:1:0.0237408547,C50pi14:1:0.0239841203,C50pi15:1:0.0213748021,C50pi16:1:0.0210717705,C50pi17:1:0.0050241805,C50pi18:1:0.0166262276,C50pi19:1:0.0143945956,C50pi20:1:0.0104391130,C50pi21:1:0.0107628277,C50pi22:1:0.0148818171,C50pi23:1:0.0321480239,C50pi24:1:0.0145477978,C50pi25:1:0.0332355807,C50pi26:1:0.0143190281,C50pi27:1:0.0234478734,C50pi28:1:0.0183044983,C50pi29:1:0.0403269452,C50pi30:1:0.0135629530,C50pi31:1:0.0091880799,C50pi32:1:0.0158270022,C50pi33:1:0.0121019379,C50pi34:1:0.0353560982,C50pi35:1:0.0404495617,C50pi36:1:0.0104569232,C50pi37:1:0.0146187792,C50pi38:1:0.0093984095,C50pi39:1:0.0146773809,C50pi40:1:0.0201635562,C50pi41:1:0.0255640273,C50pi42:1:0.0039486842,C50pi43:1:0.0393652608,C50pi44:1:0.0056415419,C50pi45:1:0.0382833580,C50pi46:1:0.0039735086,C50pi47:1:0.0140269355,C50pi48:1:0.0476703673,C50pi49:1:0.0204062788,C50pi50:1:0.0117835304}
205  LG+C50        3620212.789  52  7240529.577  7240529.595  7241083.805
Model LG+C60 is alias for LG+POISSON+G+FMIX{C60pi1:1:0.0169698865,C60pi2:1:0.0211683374,C60pi3:1:0.0276589079,C60pi4:1:0.0065675964,C60pi5:1:0.0141221416,C60pi6:1:0.0068774834,C60pi7:1:0.0146909701,C60pi8:1:0.0067225777,C60pi9:1:0.0018396660,C60pi10:1:0.0102547197,C60pi11:1:0.0230896163,C60pi12:1:0.0057941033,C60pi13:1:0.0125394534,C60pi14:1:0.0204526478,C60pi15:1:0.0070629602,C60pi16:1:0.0117982741,C60pi17:1:0.0068334668,C60pi18:1:0.0433775839,C60pi19:1:0.0318278731,C60pi20:1:0.0222546108,C60pi21:1:0.0102264969,C60pi22:1:0.0150545891,C60pi23:1:0.0134159878,C60pi24:1:0.0148552065,C60pi25:1:0.0239111516,C60pi26:1:0.0128776278,C60pi27:1:0.0222318842,C60pi28:1:0.0247444742,C60pi29:1:0.0214274810,C60pi30:1:0.0115001882,C60pi31:1:0.0076017389,C60pi32:1:0.0130258568,C60pi33:1:0.0093701965,C60pi34:1:0.0467194264,C60pi35:1:0.0441940314,C60pi36:1:0.0322263154,C60pi37:1:0.0402999891,C60pi38:1:0.0150234227,C60pi39:1:0.0104589903,C60pi40:1:0.0214742395,C60pi41:1:0.0154957836,C60pi42:1:0.0101789953,C60pi43:1:0.0227980379,C60pi44:1:0.0123204539,C60pi45:1:0.0066777583,C60pi46:1:0.0004150083,C60pi47:1:0.0344385130,C60pi48:1:0.0113663379,C60pi49:1:0.0127143049,C60pi50:1:0.0124323741,C60pi51:1:0.0262124415,C60pi52:1:0.0064994957,C60pi53:1:0.0103203293,C60pi54:1:0.0142463512,C60pi55:1:0.0215600067,C60pi56:1:0.0199150700,C60pi57:1:0.0038964200,C60pi58:1:0.0113448855,C60pi59:1:0.0128595846,C60pi60:1:0.0117656776}
206  LG+C60        3618979.908  52  7238063.816  7238063.834  7238618.044
Akaike Information Criterion:           JTT+F+R7
Corrected Akaike Information Criterion: JTT+F+R7
Bayesian Information Criterion:         JTT+F+R6
Best-fit model: JTT+F+R6 chosen according to BIC

All model information printed to 15cephala_compofail.phy.model
CPU time for ModelFinder: 598630.495 seconds (166h:17m:10s)
Wall-clock time for ModelFinder: 12703.918 seconds (3h:31m:43s)
Generating 1500 samples for ultrafast bootstrap (seed: 710344)...

NOTE: 5465 MB RAM (5 GB) is required!
Estimate model parameters (epsilon = 0.100)
1. Initial log-likelihood: -3663979.725
2. Current log-likelihood: -3614353.982
3. Current log-likelihood: -3613040.638
4. Current log-likelihood: -3612667.818
5. Current log-likelihood: -3612465.789
6. Current log-likelihood: -3612353.870
7. Current log-likelihood: -3612291.671
8. Current log-likelihood: -3612254.608
9. Current log-likelihood: -3612230.315
10. Current log-likelihood: -3612212.175
11. Current log-likelihood: -3612197.188
12. Current log-likelihood: -3612184.188
13. Current log-likelihood: -3612172.913
14. Current log-likelihood: -3612162.532
15. Current log-likelihood: -3612152.811
16. Current log-likelihood: -3612143.692
17. Current log-likelihood: -3612135.171
18. Current log-likelihood: -3612126.999
19. Current log-likelihood: -3612119.281
20. Current log-likelihood: -3612111.961
21. Current log-likelihood: -3612105.023
22. Current log-likelihood: -3612098.495
23. Current log-likelihood: -3612092.254
24. Current log-likelihood: -3612086.436
25. Current log-likelihood: -3612080.942
26. Current log-likelihood: -3612075.681
27. Current log-likelihood: -3612070.722
28. Current log-likelihood: -3612065.996
29. Current log-likelihood: -3612061.524
30. Current log-likelihood: -3612057.301
31. Current log-likelihood: -3612053.346
32. Current log-likelihood: -3612049.634
33. Current log-likelihood: -3612046.147
34. Current log-likelihood: -3612042.868
35. Current log-likelihood: -3612039.780
36. Current log-likelihood: -3612036.979
37. Current log-likelihood: -3612034.368
38. Current log-likelihood: -3612032.106
39. Current log-likelihood: -3612029.962
40. Current log-likelihood: -3612028.034
41. Current log-likelihood: -3612026.408
42. Current log-likelihood: -3612024.933
43. Current log-likelihood: -3612023.610
44. Current log-likelihood: -3612022.310
45. Current log-likelihood: -3612021.157
46. Current log-likelihood: -3612020.056
47. Current log-likelihood: -3612019.051
48. Current log-likelihood: -3612018.212
49. Current log-likelihood: -3612017.621
50. Current log-likelihood: -3612016.726
51. Current log-likelihood: -3612016.393
52. Current log-likelihood: -3612016.056
53. Current log-likelihood: -3612015.725
54. Current log-likelihood: -3612015.009
55. Current log-likelihood: -3612014.742
56. Current log-likelihood: -3612014.436
57. Current log-likelihood: -3612014.148
58. Current log-likelihood: -3612013.867
59. Current log-likelihood: -3612013.597
60. Current log-likelihood: -3612013.336
61. Current log-likelihood: -3612012.901
62. Current log-likelihood: -3612012.766
63. Current log-likelihood: -3612012.626
64. Current log-likelihood: -3612012.490
65. Current log-likelihood: -3612012.359
66. Current log-likelihood: -3612012.230
67. Current log-likelihood: -3612012.012
68. Current log-likelihood: -3612011.878
69. Current log-likelihood: -3612011.746
70. Current log-likelihood: -3612011.619
71. Current log-likelihood: -3612011.497
72. Current log-likelihood: -3612011.376
73. Current log-likelihood: -3612011.258
74. Current log-likelihood: -3612011.141
75. Current log-likelihood: -3612011.028
76. Current log-likelihood: -3612010.916
77. Current log-likelihood: -3612010.806
78. Current log-likelihood: -3612010.687
79. Current log-likelihood: -3612010.570
80. Current log-likelihood: -3612010.457
81. Current log-likelihood: -3612010.350
82. Current log-likelihood: -3612010.245
83. Current log-likelihood: -3612010.143
84. Current log-likelihood: -3612010.032
85. Current log-likelihood: -3612009.923
86. Current log-likelihood: -3612009.818
Optimal log-likelihood: -3612009.654
Site proportion and rates:  (0.328,0.010) (0.196,0.149) (0.150,0.526) (0.181,1.415) (0.110,3.335) (0.035,7.528)
Parameters optimization took 86 rounds (395.028 sec)
Computing ML distances based on estimated model parameters... 1.916 sec
Computing BIONJ tree...
0.002 seconds
Log-likelihood of BIONJ tree: -3613130.075
--------------------------------------------------------------------
|             INITIALIZING CANDIDATE TREE SET                      |
--------------------------------------------------------------------
Generating 8 parsimony trees... 8.262 second
Computing log-likelihood of 8 initial trees ... 9.459 seconds
Current best score: -3612009.654

Do NNI search on 10 best initial trees
Estimate model parameters (epsilon = 0.100)
BETTER TREE FOUND at iteration 1: -3612009.386
Iteration 10 / LogL: -3612066.562 / Time: 3h:40m:23s
Finish initializing candidate tree set (1)
Current best tree score: -3612009.386 / CPU time: 106.735
Number of iterations: 10
--------------------------------------------------------------------
|               OPTIMIZING CANDIDATE TREE SET                      |
--------------------------------------------------------------------
Iteration 20 / LogL: -3612211.197 / Time: 3h:41m:47s
Iteration 30 / LogL: -3612018.043 / Time: 3h:43m:17s (0h:28m:18s left)
Iteration 40 / LogL: -3612142.387 / Time: 3h:44m:50s (0h:20m:30s left)
Iteration 50 / LogL: -3612019.984 / Time: 3h:46m:20s (0h:15m:12s left)
Log-likelihood cutoff on original alignment: -3612136.540
Iteration 60 / LogL: -3612062.297 / Time: 3h:47m:56s (0h:11m:15s left)
Iteration 70 / LogL: -3612033.641 / Time: 3h:49m:24s (0h:7m:56s left)
Iteration 80 / LogL: -3612040.311 / Time: 3h:50m:53s (0h:5m:5s left)
Iteration 90 / LogL: -3612052.874 / Time: 3h:52m:28s (0h:2m:33s left)
Iteration 100 / LogL: -3612014.620 / Time: 3h:54m:25s (0h:0m:13s left)
Log-likelihood cutoff on original alignment: -3612136.540
NOTE: Bootstrap correlation coefficient of split occurrence frequencies: 1.000
Total number of trees received: 0
Total number of trees sent: 0
Total number of NNI searches done by myself: 102
TREE SEARCH COMPLETED AFTER 102 ITERATIONS / Time: 3h:54m:53s

--------------------------------------------------------------------
|                    FINALIZING TREE SEARCH                        |
--------------------------------------------------------------------
Performs final model parameters optimization
Estimate model parameters (epsilon = 0.010)
1. Initial log-likelihood: -3612009.386
2. Current log-likelihood: -3612009.241
3. Current log-likelihood: -3612009.044
4. Current log-likelihood: -3612008.843
5. Current log-likelihood: -3612008.655
6. Current log-likelihood: -3612008.472
7. Current log-likelihood: -3612008.287
8. Current log-likelihood: -3612008.115
9. Current log-likelihood: -3612007.946
10. Current log-likelihood: -3612007.775
11. Current log-likelihood: -3612007.615
12. Current log-likelihood: -3612007.460
13. Current log-likelihood: -3612007.306
14. Current log-likelihood: -3612007.154
15. Current log-likelihood: -3612007.018
16. Current log-likelihood: -3612006.894
17. Current log-likelihood: -3612006.751
18. Current log-likelihood: -3612006.625
19. Current log-likelihood: -3612006.521
20. Current log-likelihood: -3612006.410
21. Current log-likelihood: -3612006.288
22. Current log-likelihood: -3612006.188
23. Current log-likelihood: -3612006.095
24. Current log-likelihood: -3612006.003
25. Current log-likelihood: -3612005.902
26. Current log-likelihood: -3612005.793
27. Current log-likelihood: -3612005.704
28. Current log-likelihood: -3612005.619
29. Current log-likelihood: -3612005.538
30. Current log-likelihood: -3612005.446
31. Current log-likelihood: -3612005.347
32. Current log-likelihood: -3612005.267
33. Current log-likelihood: -3612005.191
34. Current log-likelihood: -3612005.131
35. Current log-likelihood: -3612005.044
36. Current log-likelihood: -3612004.954
37. Current log-likelihood: -3612004.881
38. Current log-likelihood: -3612004.824
39. Current log-likelihood: -3612004.766
40. Current log-likelihood: -3612004.710
41. Current log-likelihood: -3612004.654
42. Current log-likelihood: -3612004.599
43. Current log-likelihood: -3612004.535
44. Current log-likelihood: -3612004.455
45. Current log-likelihood: -3612004.403
46. Current log-likelihood: -3612004.351
47. Current log-likelihood: -3612004.300
48. Current log-likelihood: -3612004.250
49. Current log-likelihood: -3612004.201
50. Current log-likelihood: -3612004.154
51. Current log-likelihood: -3612004.096
52. Current log-likelihood: -3612004.026
53. Current log-likelihood: -3612003.980
54. Current log-likelihood: -3612003.934
55. Current log-likelihood: -3612003.890
56. Current log-likelihood: -3612003.846
57. Current log-likelihood: -3612003.803
58. Current log-likelihood: -3612003.761
59. Current log-likelihood: -3612003.719
60. Current log-likelihood: -3612003.668
61. Current log-likelihood: -3612003.607
62. Current log-likelihood: -3612003.567
63. Current log-likelihood: -3612003.528
64. Current log-likelihood: -3612003.489
65. Current log-likelihood: -3612003.451
66. Current log-likelihood: -3612003.413
67. Current log-likelihood: -3612003.377
68. Current log-likelihood: -3612003.341
69. Current log-likelihood: -3612003.305
70. Current log-likelihood: -3612003.271
71. Current log-likelihood: -3612003.249
72. Current log-likelihood: -3612003.167
73. Current log-likelihood: -3612003.112
74. Current log-likelihood: -3612003.078
75. Current log-likelihood: -3612003.044
76. Current log-likelihood: -3612003.011
77. Current log-likelihood: -3612002.990
78. Current log-likelihood: -3612002.956
79. Current log-likelihood: -3612002.936
80. Current log-likelihood: -3612002.902
81. Current log-likelihood: -3612002.883
82. Current log-likelihood: -3612002.850
83. Current log-likelihood: -3612002.831
84. Current log-likelihood: -3612002.799
85. Current log-likelihood: -3612002.781
86. Current log-likelihood: -3612002.741
87. Current log-likelihood: -3612002.706
88. Current log-likelihood: -3612002.675
89. Current log-likelihood: -3612002.658
90. Current log-likelihood: -3612002.627
91. Current log-likelihood: -3612002.610
92. Current log-likelihood: -3612002.581
93. Current log-likelihood: -3612002.565
94. Current log-likelihood: -3612002.536
95. Current log-likelihood: -3612002.520
96. Current log-likelihood: -3612002.503
97. Current log-likelihood: -3612002.475
98. Current log-likelihood: -3612002.460
99. Current log-likelihood: -3612002.443
Optimal log-likelihood: -3612002.443
Site proportion and rates:  (0.335,0.010) (0.196,0.160) (0.156,0.562) (0.180,1.513) (0.103,3.564) (0.030,7.927)
Parameters optimization took 99 rounds (203.646 sec)
BEST SCORE FOUND : -3612002.443
Creating bootstrap support values...
Split supports printed to NEXUS file 15cephala_compofail.phy.splits.nex
Total tree length: 4.735

Total number of iterations: 102
CPU time used for tree search: 45072.774 sec (12h:31m:12s)
Wall-clock time used for tree search: 976.543 sec (0h:16m:16s)
Total CPU time used: 672039.567 sec (186h:40m:39s)
Total wall-clock time used: 14296.945 sec (3h:58m:16s)

Computing bootstrap consensus tree...
Reading input file 15cephala_compofail.phy.splits.nex...
27 taxa and 59 splits.
Consensus tree written to 15cephala_compofail.phy.contree
Reading input trees file 15cephala_compofail.phy.contree
Log-likelihood of consensus tree: -3612002.428

Analysis results written to: 
  IQ-TREE report:                15cephala_compofail.phy.iqtree
  Maximum-likelihood tree:       15cephala_compofail.phy.treefile
  Likelihood distances:          15cephala_compofail.phy.mldist

Ultrafast bootstrap approximation results written to:
  Split support values:          15cephala_compofail.phy.splits.nex
  Consensus tree:                15cephala_compofail.phy.contree
  Screen log file:               15cephala_compofail.phy.log

Date and Time: Tue Apr  7 20:34:28 2020
